Table 3 List of potential candidate genes related with salt tolerance in cotton identified through GWAS (Xu et al. 2021)
Chr | Gene | Trait | Annotation | Â |
|---|---|---|---|---|
A05 | GH_A05G3644 | RSDW16 | Cytochrome c oxidase subunit 6b- 2 | |
A05 | GH_A05G3645 | RSDW16 | Transposon Ty3-G Gag-Pol polyprotein | |
A05 | GH_A05G3646 | RSDW16 | Tetratricopeptide repeat protein 1 | |
A05 | GH_A05G3647 | RSDW16 | Putative clathrin assembly protein | |
A07 | GH_A07G2207 | RSFW16, RSFW17 | no | |
A07 | GH_A07G2208 | RSFW16, RSFW17 | Subtilisin-like protease SBT5.3 | |
A07 | GH_A07G2209 | RSFW16, RSFW17 | Ras-related protein RABB1c | |
A07 | GH_A07G2210 | RSFW16, RSFW17 | Glucose- 1-phosphate adenylyltransferase small subunit 2, chloroplastic | |
A07 | GH_A07G2211 | RSFW16, RSFW17 | no | |
A07 | GH_A07G2212 | RSFW16, RSFW17 | no | |
A07 | GH_A07G2213 | RSFW16, RSFW17 | Myb family transcription factor APL | |
A07 | GH_A07G2214 | RSFW16, RSFW17 | Transmembrane 9 superfamily member 12 | |
A07 | GH_A07G2215 | RSFW16, RSFW17 | no | |
A07 | GH_A07G2216 | RSFW16, RSFW17, RPH17 | Auxilin-related protein 1 | |
A07 | GH_A07G2217 | RSFW16, RSFW17, RPH17 | 60S ribosomal protein L5 | |
A07 | GH_A07G2218 | RSFW16, RSFW17, RPH17 | Ribonuclease 2 | |
A07 | GH_A07G2219 | RSFW16, RSFW17, RPH17 | Mediator of RNA polymerase II transcription subunit 19a | |
A07 | GH_A07G2220 | RSFW16, RSFW17, RPH17 | Acyl-coenzyme A thioesterase 9, mitochondrial | |
A07 | GH_A07G2221 | RSFW16, RSFW17, RPH17 | UDP-glycosyltransferase 74 F2 | |
A07 | GH_A07G2222 | RSFW16, RSFW17, RPH17 | Probably inactive leucine-rich repeat receptor-like protein kinase At5 g48380 | |
A07 | GH_A07G2223 | RSFW16, RSFW17, RPH17 | FRIGIDA-like protein 3 | |
A07 | GH_A07G2224 | RSFW16, RSFW17, RPH17 | Ubiquitin-like-conjugating enzyme ATG10 | |
A07 | GH_A07G2225 | RSFW16, RSFW17, RPH17 | Glutamate receptor 2.7 | |
A07 | GH_A07G2226 | RSFW16, RSFW17, RPH17 | Glutamate receptor 1.3 | |
A07 | GH_A07G2227 | RSFW16, RSFW17, RPH17 | no | |
A07 | GH_A07G2228 | RSFW16, RSFW17, RPH17 | Protein FAR1-RELATED SEQUENCE 5 | |
A07 | GH_A07G2229 | RSFW16, RSFW17, RPH17 | Calmodulin-like protein 7 | |
A07 | GH_A07G2230 | RSFW16, RSFW17, RPH17 | Probable linoleate 9S-lipoxygenase 4 | |
A07 | GH_A07G2231 | RSFW16, RSFW17, RPH17 | Uncharacterized protein | |
A07 | GH_A07G2232 | RSFW16, RSFW17, RPH17 | Probable sodium/metabolite cotransporter BASS3, chloroplastic | |
A07 | GH_A07G2233 | RSFW16, RSFW17, RPH17 | no | |
A08 | GH_A08G0481 | RSFW16, RSDW16 | Zinc finger CCCH domain-containing protein 32 | |
A08 | GH_A08G0482 | RSFW16, RSDW16 | no | |
A08 | GH_A08G0483 | RSFW16, RSDW16 | Protein TRANSPORT INHIBITOR RESPONSE 1 | |