Table 4 Summary of omics databases and weblink in cotton

Cottongen

https://www.cottongen.org/

Provides genomic, genetic and breeding resources of cotton

(Yu et al., 2014)

CottonFGD

https://cottonfgd.org/

Provides genetics and omics data, including genetic marker annotations, structural annotations, functional annotations, RNA-seq expression datasets, and population resequencing data

(Zhu et al., 2017)

GCGI

https://cotton.hzau.edu.cn/

Includes genomics data (genomic assembles and annotation files) of TM-1 accession of G. hirsutum and 3–79 accession of G. barbadense, SNP, and phenotypic data for GWAS in G. hirsutum

(Wang et al., 2019a, b)

NCBI

https://www.ncbi.nlm.nih.gov/genome/?term=cotton

A major source of bioinformatics and service tools also provides genome, transcript and protein data of different cotton species

(Wheeler et al., 2007)

GraP

http://structuralbiology.cau.edu.cn/GraP/

A source for functional genomics analysis in G. raimondi

(Zhang et al., 2015)

ccNET

http://structuralbiology.cau.edu.cn/gossypium/

A platform for comparative gene functional analysis across diploid and polyploidy species of cotton

(You et al., 2017)