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Table 3 The annotation of key candidate genes

From: Identification of candidate genes controlling fiber quality traits in upland cotton through integration of meta-QTL, significant SNP and transcriptomic data

Traits

Gene ID

Annotation

FL

Gh_D08G1950

Probable copper-transporting ATPase HMA5

FL

Gh_D06G0479

Basic endochitinase

FL

Gh_D11G1626

COBRA-like protein 4

FL

Gh_D13G1900

WAT1-related protein At1g09380

FL

Gh_D10G0833

Not available

FL

Gh_D13G1965

Protein WVD2-like 1

FL

Gh_A09G1231

40S ribosomal protein S28

FL

Gh_D08G1970

Probable aquaporin PIP1–2

FL

Gh_D04G1574

Snakin-1

FS

Gh_A01G1474

WAT1-related protein At1g25270

FS

Gh_A05G2203

Not available

FS

Gh_D08G2110

CASP-like protein 5A2

FS

Gh_A10G2036

Rop guanine nucleotide exchange factor 5

FS

Gh_A07G1801

Peptidyl-prolyl cis-trans isomerase FKBP15–1

FU

Gh_A11G2663

Protein WVD2-like 1

FU

Gh_D11G2059

Not available

FE

Gh_A13G0282

Xylulose kinase

FE

Gh_A13G0354

Not available

FE

Gh_A11G1313

EPIDERMAL PATTERNING FACTOR-like protein 9

MIC

Gh_D11G1416

Transcriptional corepressor LEUNIG_HOMOLOG